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James McInerney's Lab Website

  • Home
    • About Manchester
  • Social Media
    • Blog
    • Instagram
    • Twitter
    • Facebook
    • Other Media
      • Press Coverage
      • Photo gallery
      • SMBE2012
      • Research Day 2012
      • Summer Lunch 2012
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        • BI101
  • James McInerney
  • Research Group
    • Dr. David Newman
    • Dr. Martin Rusilowicz
    • Dr. Matthew Moore
    • Dr. Fiona Whelan
    • Rob Leigh
    • Yaqing (Sera) Ou
    • Ignacio Riquelme Medina
    • Former Lab Members
  • Outputs
    • Papers
    • Software
      • CLANN: Software for inferring phylogenetic supertrees
      • CRANN: Software for inferring selection
      • GCUA: General Codon Usage Analysis
      • ModelGenerator: amino acid and nucleotide substitution model selection
      • PutGaps : DNA gapped file from Amino Acid alignment
      • TIGER: Identifying rapidly-evolving characters in evolutionary data.
    • Manchester Evolution Symposium 2017
  • Stuff
  • Contact
Home›Author: admin (Page 3)

Author: admin

admin

admin

Welcome to the website of Professor James McInerney at The University of Manchester. Please get in touch through the contact page

  • Goods thinking versus tree-thinking

    Uncategorized
    August 31, 2011
    by admin
    Goods-thinking versus Tree-thinking In the famous Monty Python "Dead Parrot" sketch, John Cleese returns to a pet shop where he has just bought a parrot and asks for his money ...
    Read More
  • BBC report on Cotton and McInerney PNAS paper 2010

    Eukaryotes, In the Media
    October 6, 2010
    by admin
    The BBC have reported on the recent manuscript in PNAS by James Cotton and James McInerney. The article is here.
    Read More
  • CLANN: Software for inferring phylogenetic supertrees.

    Software
    September 17, 2007
    by admin
    CLANN: Software for inferring phylogenetic supertrees. What is clann? Clann (the Irish word for "family"), is a free software program designed and written by Chris Creevey at the Bioinformatics and ...
    Read More
  • Scientific American Article features Our Cancer Evolution Work

    In the Media
    January 16, 2007
    by admin
    Carl Zimmer has written a very nice article for Scientific American where he discusses the influence of evolution on cancer.  He interviewed Dr. McInerney about his work with Dr. Mary ...
    Read More
  • ModelGenerator: amino acid and nucleotide substitution model selection

    Software
    September 17, 2006
    by admin
    ModelGenerator is a a free, easy-to-use model selection program, designed and written by Thomas Keane, that selects optimal amino acid and nucleotide substitution models from Fasta or Phylip alignments. ModelGenerator ...
    Read More
  • CRANN: Software for inferring selection

    Software
    September 19, 2004
    by admin
    CRANN Crann (pronounced 'crown') is the Irish word for 'tree'. The program Crann has been developed in order to provide fast heuristic methods of detecting adaptive evolution in protein-coding genes. ...
    Read More
  • PutGaps : DNA gapped file from Amino Acid alignment

    Software
    September 17, 2004
    by admin
    PutGaps : DNA gapped file from Amino Acid alignment Copyright © David Fitzpatrick, Melissa Pentony 2004 PutGaps is a free software program designed and written by David Fitzpatrick and Melissa ...
    Read More
  • GCUA: General Codon Usage Analysis

    Software
    September 17, 1998
    by admin
    GCUA: General Codon Usage Analysis GCUA was initially written while working at the Natural History Museum, London, however it is now being developed at the University of Manchester. The pdf describing the ...
    Read More
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Software

  • TIGER: Identifying rapidly-evolving characters in evolutionary data.

    Software
    September 17, 2011
  • CLANN: Software for inferring phylogenetic supertrees.

    Software
    September 17, 2007
  • ModelGenerator: amino acid and nucleotide substitution model selection

    Software
    September 17, 2006
  • CRANN: Software for inferring selection

    Software
    September 19, 2004
  • PutGaps : DNA gapped file from Amino Acid alignment

    Software
    September 17, 2004

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Most recent news items

  • Manchester Evolution Symposium
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  • SMBE 2017 Liveblog
  • Short Video Explaining Pangenomes Paper
  • Latest Paper: News and Views Article in Nature on ASGARD Archaebacteria
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